Basic Information
Locus ID:
add.evm.TU.utg000023l.78
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000023l | 1592192 | 1593259 | - | add.evm.TU.utg000023l.78 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.93 | 38,982.08 Da | 39.68 | 73.61 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 170 | 202 | 1.4E-7 | IPR006652 |
| Pfam | PF13964 | Kelch motif | 107 | 157 | 1.8E-8 | - |
| SUPERFAMILY | SSF117281 | Kelch motif | 80 | 338 | 3.4E-39 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 49 | 1.05E-7 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 43 | 349 | 8.5E-38 | IPR015915 |
| SMART | SM00256 | fbox_2 | 8 | 48 | 8.3E-4 | IPR001810 |
| SMART | SM00612 | kelc_smart | 118 | 166 | 0.027 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 3.6E-8 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_021665325.1 | F-box/kelch-repeat protein At1g80440-like [Hevea brasiliensis] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | B9RUU9 | F-box/kelch-repeat protein At1g80440-like OS=Ricinus communis OX=3988 GN=RCOM_0894530 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology