Basic Information
Locus ID:
add.evm.TU.utg000023l.39
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000023l | 1080219 | 1081052 | - | add.evm.TU.utg000023l.39 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 16,330.93 Da | 37.87 | 97.33 | 0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 39 | 143 | 3.64E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 4 | 145 | 6.9E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 146 | 13.135447 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 113 | 125 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25760.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021664364.1 | casein kinase 1-like protein HD16, partial [Hevea brasiliensis] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9F2I1 | Protein kinase domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.2765.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB03g041870.2N |
| Plumbaginaceae | Limonium bicolor | 4 | Lb1G02423, Lb5G27269, Lb6G32216, Lb6G32217 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000023l.39 |