Basic Information
Locus ID:
add.evm.TU.utg000023l.32
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000023l | 841161 | 842046 | - | add.evm.TU.utg000023l.32 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 28,209.35 Da | 49.78 | 101.36 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 3 | 39 | 2.7E-8 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 104 | 207 | 5.1E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 1 | 53 | 4.58E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 43 | 8.2E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 91 | 248 | 4.9E-7 | IPR032675 |
| SMART | SM00256 | fbox_2 | 7 | 47 | 9.7E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 35 | 10.133335 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02920.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_050235167.1 | F-box/FBD/LRR-repeat protein At4g26340-like isoform X2 [Mercurialis annua] | 0 |
| Q1PE04 | F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana OX=3702 GN=FBL25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A6M6U9 | F-box domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_035374 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology