Basic Information
Locus ID:
add.evm.TU.utg000022l.263
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000022l | 7431999 | 7433555 | + | add.evm.TU.utg000022l.263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 57,497.08 Da | 48.24 | 82.20 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04873 | ACT_UUR-ACR-like | 466 | 517 | 0.00115574 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 62 | 249 | 4.3E-38 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 357 | 402 | 2.5E-11 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 357 | 423 | 7.33E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 340 | 420 | 6.5E-16 | IPR036638 |
| SMART | SM00353 | finulus | 359 | 408 | 4.0E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 353 | 402 | 16.335711 | IPR011598 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46830.1 | NACL-inducible gene 1. Calcium-binding transcription factor involved in salt stress signaling. | 0 |
| RefSeq | XP_021646492.1 | transcription factor MYC2-like [Hevea brasiliensis] | 0 |
| Q9LUK7 | Transcription factor bHLH28 OS=Arabidopsis thaliana OX=3702 GN=BHLH28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A061G206 | Basic helix-loop-helix DNA-binding family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_015640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology