Basic Information
Locus ID:
add.evm.TU.utg000019l.27
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000019l | 537799 | 540936 | + | add.evm.TU.utg000019l.27 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 114,075.94 Da | 48.70 | 64.18 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 183 | 266 | 6.73958E-26 | - |
| Pfam | PF00855 | PWWP domain | 182 | 266 | 3.8E-19 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 179 | 279 | 2.29E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 174 | 275 | 2.7E-26 | - |
| SMART | SM00293 | PWWP_4 | 180 | 241 | 2.4E-10 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 182 | 243 | 14.97416 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 636 | 684 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 756 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 804 | 871 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 832 | 851 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 752 | - | - |
| Coils | Coil | Coil | 612 | 632 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.2 | - | 0 |
| RefSeq | XP_015578174.2 | PWWP domain-containing protein 3 isoform X2 [Ricinus communis] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JFT2 | Uncharacterized protein LOC8289805 isoform X1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology