Basic Information
Locus ID:
add.evm.TU.utg000019l.174
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Ubiquitin-2 like Rad60 SUMO-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000019l | 3065840 | 3066761 | + | add.evm.TU.utg000019l.174 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 9,867.30 Da | 34.19 | 74.20 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 11 | 81 | 5.4E-17 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 87 | 2.65E-18 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 87 | 2.9E-24 | - |
| SMART | SM00213 | ubq_7 | 11 | 83 | 0.0039 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 11 | 87 | 11.899466 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_028107512.1 | small ubiquitin-related modifier 1-like [Camellia sinensis] | 0 |
| TrEMBL | A0A151RBW8 | Small ubiquitin-related modifier OS=Cajanus cajan OX=3821 GN=KK1_038688 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology