Basic Information
Locus ID:
add.evm.TU.utg000018l.257
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000018l | 7741608 | 7744004 | + | add.evm.TU.utg000018l.257 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 87,666.78 Da | 52.32 | 82.47 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 492 | 776 | 3.41615E-95 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 239 | 265 | 1.7E-5 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 489 | 774 | 7.7E-47 | IPR001245 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 207 | 228 | 1.9E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 466 | 774 | 1.19E-76 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 106 | 304 | 2.44E-22 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 577 | 789 | 1.4E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 459 | 576 | 9.0E-32 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 69 | 313 | 1.4E-25 | IPR009091 |
| SMART | SM00220 | serkin_6 | 486 | 778 | 2.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 486 | 787 | 38.505974 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 492 | 514 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 622 | 634 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 450 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_048227388.1 | serine/threonine-protein kinase-like protein CCR4 [Ricinus communis] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2QL76 | Serine/threonine-protein kinase-like protein CCR4 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology