Basic Information
Locus ID:
add.evm.TU.utg000016l.86
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000016l | 1564456 | 1565556 | + | add.evm.TU.utg000016l.86 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 41,265.43 Da | 58.90 | 73.53 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06606 | STKc_MAPKKK | 2 | 265 | 7.98053E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 265 | 3.4E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 352 | 2.29E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 289 | 5.7E-58 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 3 | 265 | 37.163246 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 121 | 133 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 9 | 31 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G36950.1 | mitogen-activated protein kinase kinase kinase 21. member of MEKK subfamily | 0 |
| RefSeq | XP_050260659.1 | mitogen-activated protein kinase kinase kinase 20-like [Quercus robur] | 0 |
| Q54R82 | Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium discoideum OX=44689 GN=mkkA PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A1V410 | Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS=Morella rubra OX=262757 GN=CJ030_MR7G000716 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 9 | AT2G05060.1, AT2G34290.1, AT2G41910.1, AT2G41920.1 ... |
| Brassicaceae | Eutrema salsugineum | 17 | Thhalv10000714m.g.v1.0, Thhalv10012027m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 8 | Sp1g33950.v2.2, Sp2g03310.v2.2, Sp4g12780.v2.2 ... |
| Brassicaceae | Brassica nigra | 17 | BniB01g003760.2N, BniB06g001160.2N, BniB06g001430.2N ... |
| Casuarinaceae | Casuarina glauca | 2 | Cgl09G0332, Cgl09G0845 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.2093 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13161 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-3444 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000016l.86 |