Basic Information
Locus ID:
add.evm.TU.utg000016l.148
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000016l | 2818424 | 2819443 | - | add.evm.TU.utg000016l.148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 37,865.05 Da | 49.01 | 70.09 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 8 | 46 | 9.1E-7 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 157 | 202 | 1.9E-10 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 114 | 154 | 4.1E-7 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 49 | 2.09E-10 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 81 | 260 | 1.12E-35 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 40 | 322 | 2.0E-35 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 8 | 39 | 2.8E-5 | - |
| SMART | SM00612 | kelc_smart | 168 | 215 | 1.6E-4 | IPR006652 |
| SMART | SM00256 | fbox_2 | 9 | 49 | 3.5E-7 | IPR001810 |
| SMART | SM00612 | kelc_smart | 119 | 167 | 3.3E-5 | IPR006652 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 3 | 50 | 9.444481 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_011047101.1 | PREDICTED: F-box/kelch-repeat protein At1g15670-like [Populus euphratica] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L2B4 | F-box/kelch-repeat protein At1g15670-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology