Basic Information
Locus ID:
add.evm.TU.utg000011l.97
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000011l | 1655527 | 1656726 | + | add.evm.TU.utg000011l.97 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 44,159.13 Da | 41.01 | 89.40 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 29 | 212 | 1.8E-18 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 313 | 389 | 6.41E-12 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 305 | 390 | 4.3E-20 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 30 | 214 | 8.1E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 338 | 399 | 8.895247 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 344 | 367 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 246 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_002534329.3 | receptor-like protein kinase FERONIA [Ricinus communis] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | B9T7W0 | Serine/threonine-protein kinase PBS1, putative OS=Ricinus communis OX=3988 GN=RCOM_0087290 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 7 | nbisL1-mrna-15250, nbisL1-mrna-15253, nbisL1-mrna-15254 ... |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12685 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.97 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-18379, nbisL1-mrna-21419 |