Basic Information
Locus ID:
add.evm.TU.utg000011l.94
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000011l | 1596896 | 1600318 | + | add.evm.TU.utg000011l.94 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.95 | 110,568.33 Da | 40.04 | 98.04 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 413 | 435 | 0.059 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 863 | 939 | 1.0E-8 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 266 | 288 | 0.023 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 314 | 336 | 0.39 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 624 | 683 | 9.0E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 172 | 231 | 1.7E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 79 | 9.3E-11 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 844 | 946 | 9.25E-20 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 531 | 738 | 5.78E-35 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 138 | 478 | 4.24E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 521 | 754 | 2.6E-49 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 936 | 1018 | 3.2E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 362 | 505 | 2.7E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 348 | 7.9E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 240 | 5.8E-45 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 823 | 935 | 1.2E-27 | - |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 193 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 169 | 350.0 | IPR003591 |
| SMART | SM00219 | tyrkin_6 | 861 | 1012 | 0.0097 | IPR020635 |
| SMART | SM00369 | LRR_typ_2 | 622 | 645 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 312 | 336 | 4.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 694 | 718 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 670 | 693 | 56.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 861 | 1020 | 12.626622 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 672 | 695 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 867 | 889 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 267 | 280 | 5.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 670 | 683 | 5.7E-5 | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.1 | receptor-like protein kinase 2. | 0 |
| RefSeq | XP_012084828.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Jatropha curcas] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M9E5 | Uncharacterized protein MANES_01G096300 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology