Basic Information
Locus ID:
add.evm.TU.utg000011l.560
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Ribonuclease 2-5A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000011l | 13412855 | 13414845 | - | add.evm.TU.utg000011l.560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 35,073.64 Da | 29.11 | 99.29 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 168 | 212 | 1.5E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 135 | 270 | 6.37E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 103 | 280 | 7.5E-16 | - |
| SMART | SM00220 | serkin_6 | 72 | 287 | 0.004 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 322 | 10.18144 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 182 | 194 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 322 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17520.1 | Endoribonuclease/protein kinase IRE1-like. Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants. | 0 |
| RefSeq | XP_043814931.1 | serine/threonine-protein kinase/endoribonuclease IRE1a isoform X3 [Manihot esculenta] | 0 |
| Q9C5S2 | Serine/threonine-protein kinase/endoribonuclease IRE1a OS=Arabidopsis thaliana OX=3702 GN=IRE1A PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KIV2 | non-specific serine/threonine protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0614, Ceq01G0618 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10412 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-11638 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.560 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-23115 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23703 |