Basic Information
Locus ID:
add.evm.TU.utg000011l.552
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Short Name:
CHIA1
Description:
Endochitinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000011l | 13277215 | 13278496 | - | add.evm.TU.utg000011l.552 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 25,876.75 Da | 32.29 | 68.22 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 120 | 234 | 3.90887E-57 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 21 | 59 | 1.27947E-17 | - |
| Pfam | PF00182 | Chitinase class I | 119 | 234 | 9.8E-66 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 22 | 59 | 1.6E-14 | IPR001002 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 82 | 240 | 3.37E-62 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 22 | 63 | 1.83E-13 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 144 | 240 | 1.4E-61 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 20 | 61 | 3.5E-17 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 89 | 119 | 1.6E-7 | - |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 120 | 143 | 1.4E-61 | - |
| SMART | SM00270 | ChitinBD_3 | 22 | 59 | 2.9E-18 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 119 | 241 | 3.6E-50 | IPR016283 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 121 | 1.5E-26 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 20 | 61 | 10.791357 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 147 | 157 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 38 | 45 | 2.7E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 45 | 52 | 2.7E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 30 | 38 | 2.7E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_041012500.1 | endochitinase-like isoform X2 [Juglans microcarpa x Juglans regia] | 0 |
| P36907 | Endochitinase OS=Pisum sativum OX=3888 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N5M139 | Chitin-binding type-1 domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_011329 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology