Basic Information
Locus ID:
add.evm.TU.utg000010l.151
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000010l | 2740504 | 2744418 | + | add.evm.TU.utg000010l.151 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 130,368.06 Da | 29.82 | 110.58 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1029 | 1089 | 2.6E-9 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 710 | 769 | 2.5E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 530 | 589 | 1.0E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 220 | 242 | 0.49 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 71 | 6.8E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 365 | 621 | 5.1E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1013 | 1191 | 2.21E-27 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 366 | 5.61E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 627 | 919 | 1.93E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 216 | 1.6E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 145 | 8.9E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 988 | 1091 | 2.9E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 628 | 926 | 9.8E-84 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 364 | 627 | 2.0E-76 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1092 | 1198 | 4.5E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 217 | 363 | 1.5E-44 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 552 | 576 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 732 | 755 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 756 | 780 | 1.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 878 | 911 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 120 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 684 | 708 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 314 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 192 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 529 | 551 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 830 | 854 | 21.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 576 | 602 | 72.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 854 | 880 | 77.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 121 | 147 | 16.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 290 | 311 | 490.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 756 | 771 | 69.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 193 | 220 | 150.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 684 | 716 | 310.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 338 | 361 | 280.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 97 | 116 | 540.0 | - |
| SMART | SM00369 | LRR_typ_2 | 218 | 242 | 35.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1025 | 1198 | 11.80685 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 758 | 780 | 7.049695 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1031 | 1054 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 756 | 769 | 3.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 579 | 592 | 3.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07280.1 | Leucine-rich repeat transmembrane protein kinase. Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. | 0 |
| RefSeq | XP_002510817.1 | leucine-rich repeat receptor protein kinase EMS1 [Ricinus communis] | 0 |
| Q9LYN8 | Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana OX=3702 GN=EMS1 PE=1 SV=1 | 0 | |
| TrEMBL | B9R9E2 | Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis OX=3988 GN=RCOM_1496650 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg12909, jg14016, jg2319, jg889 |
| Anacardiaceae | Pistacia vera | 8 | pistato.v30034580, pistato.v30167950, pistato.v30168050 ... |
| Apiaceae | Apium graveolens | 1 | Ag2G01986 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G03190 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G07280.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012465m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g35610.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g053610.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2102 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2175 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2700 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00010232 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1BG058770 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12656, nbisL1-mrna-29200 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-10442, nbisL1-mrna-7229 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-12927, nbisL1-mrna-12928, nbisL1-mrna-2139 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000008l.31, add.evm.TU.utg000010l.151 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17149, nbisL1-mrna-17646 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-20612, nbisL1-mrna-6260 |
| Salicaceae | Populus euphratica | 2 | populus_peu29255, populus_peu30617 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631870 |
| Solanaceae | Solanum chilense | 1 | SOLCI001805500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014643 |