Basic Information
Locus ID:
add.evm.TU.utg000009l.327
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000009l | 8606993 | 8609599 | + | add.evm.TU.utg000009l.327 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 93,487.55 Da | 47.17 | 68.00 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 215 | 297 | 2.73158E-27 | - |
| Pfam | PF00855 | PWWP domain | 211 | 298 | 1.3E-14 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 205 | 332 | 9.63E-24 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 199 | 304 | 1.8E-22 | - |
| SMART | SM00293 | PWWP_4 | 211 | 272 | 6.1E-4 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 213 | 262 | 13.324754 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 686 | 715 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 686 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 849 | 868 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021620808.1 | uncharacterized protein LOC110621068 [Manihot esculenta] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2JKQ6 | Uncharacterized protein MANES_08G003300 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology