Basic Information
Locus ID:
add.evm.TU.utg000009l.208
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000009l | 6532537 | 6533574 | + | add.evm.TU.utg000009l.208 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 38,610.99 Da | 57.42 | 69.13 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 11 | 51 | 2.6E-4 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 118 | 160 | 2.9E-7 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 163 | 208 | 6.7E-9 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 54 | 4.45E-7 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 87 | 276 | 1.31E-35 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 8 | 65 | 4.4E-5 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 74 | 331 | 4.2E-33 | IPR015915 |
| SMART | SM00256 | fbox_2 | 14 | 54 | 4.2E-4 | IPR001810 |
| SMART | SM00612 | kelc_smart | 125 | 173 | 7.4E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 174 | 221 | 2.4E-4 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_002309282.1 | F-box/kelch-repeat protein At1g15670 [Populus trichocarpa] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2L2B4 | F-box/kelch-repeat protein At1g15670-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology