Basic Information
Locus ID:
add.evm.TU.utg000008l.504
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
ubiquitin protein ligase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000008l | 12734497 | 12736046 | + | add.evm.TU.utg000008l.504 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.86 | 29,626.96 Da | 39.17 | 77.71 | -0.34 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_020974438.1 | zinc finger protein BRUTUS-like [Arachis ipaensis] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5VI47 | Putative RING finger protein C2F3.16 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0014191 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.2274 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-25182 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000008l.504 |