Basic Information
Locus ID:
add.evm.TU.utg000007l.102
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000007l | 8256255 | 8256851 | + | add.evm.TU.utg000007l.102 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 22,693.85 Da | 52.92 | 95.56 | -0.01 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_026446618.1 | F-box protein CPR1-like isoform X1 [Papaver somniferum] | 0 |
| Q9SFC7 | F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4Y7INE1 | FBA_1 domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_017422 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.2221 |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-18013, nbisL1-mrna-18017, nbisL1-mrna-18018 ... |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-8373 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000007l.102 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-23281 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-10746 |