Basic Information
Locus ID:
add.evm.TU.utg000006l.101
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000006l | 2282639 | 2283847 | - | add.evm.TU.utg000006l.101 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 43,792.86 Da | 38.32 | 104.53 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 197 | 212 | 0.59 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 72 | 1.2E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 222 | 242 | 1.9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 106 | 164 | 7.6E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 373 | 9.07E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 290 | 375 | 2.7E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 222 | 289 | 1.7E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 220 | 5.9E-42 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 153 | 175 | 7.457832 | IPR001611 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_012092328.1 | LRR receptor-like serine/threonine-protein kinase SIK1 [Jatropha curcas] | 0 |
| TrEMBL | A0A2C9VU21 | LRRNT_2 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_05G070900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology