Basic Information
Locus ID:
add.evm.TU.utg000003l.56
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 1749086 | 1750558 | - | add.evm.TU.utg000003l.56 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 54,665.00 Da | 49.00 | 86.33 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 311 | 374 | 1.41913E-38 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 316 | 361 | 2.4E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 25 | 213 | 3.4E-52 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 304 | 374 | 1.3E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 310 | 376 | 5.6E-17 | IPR036638 |
| SMART | SM00353 | finulus | 318 | 367 | 1.8E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 312 | 361 | 16.831081 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 290 | - | - |
| Coils | Coil | Coil | 351 | 378 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46830.1 | NACL-inducible gene 1. Calcium-binding transcription factor involved in salt stress signaling. | 0 |
| RefSeq | XP_021647373.1 | transcription factor MYC2-like [Hevea brasiliensis] | 0 |
| A0A060KY90 | Transcription factor MYC1 OS=Solanum lycopersicum OX=4081 GN=MYC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2NYG9 | BHLH domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology