Basic Information
Locus ID:
add.evm.TU.utg000003l.144
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 5474511 | 5477697 | + | add.evm.TU.utg000003l.144 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 99,452.09 Da | 31.90 | 103.13 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 296 | 317 | 1.7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 176 | 198 | 0.0076 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 1.2E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 487 | 547 | 6.3E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 716 | 783 | 1.1E-5 | IPR001245 |
| SUPERFAMILY | SSF52047 | RNI-like | 261 | 600 | 1.41E-67 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 313 | 1.09E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 715 | 883 | 2.33E-23 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 262 | 367 | 1.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 368 | 631 | 3.2E-76 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 909 | 2.6E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 709 | 783 | 5.5E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 164 | 261 | 2.0E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 152 | 7.9E-27 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 438 | 461 | 64.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 102 | 126 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 4.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 463 | 486 | 250.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 712 | 918 | 9.927028 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 718 | 742 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 884 | 918 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 889 | 918 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_034916139.1 | MDIS1-interacting receptor like kinase 1 [Populus alba] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U5QP46 | Leucine-rich repeat transmembrane protein kinase OS=Populus alba OX=43335 GN=D5086_0000067470 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology