Basic Information
Locus ID:
add.evm.TU.utg000003l.105
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 4371164 | 4372432 | + | add.evm.TU.utg000003l.105 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 43,322.97 Da | 47.55 | 97.16 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 31 | 97 | 8.2E-6 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 192 | 324 | 6.5E-18 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 25 | 168 | 2.09E-17 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 178 | 325 | 1.7E-21 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 170 | 325 | 5.7E-15 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 18 | 169 | 3.2E-10 | IPR036378 |
| SMART | SM00554 | fasc_3 | 220 | 325 | 1.8E-14 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 19 | 166 | 12.011974 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 180 | 322 | 14.789349 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 392 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60900.1 | FASCICLIN-like arabinogalactan-protein 10. | 0 |
| RefSeq | XP_050236131.1 | fasciclin-like arabinogalactan protein 10 [Mercurialis annua] | 0 |
| Q9LZX4 | Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana OX=3702 GN=FLA10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2QP57 | Fasciclin-like arabinogalactan protein 8 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology