Basic Information
Locus ID:
add.evm.TU.utg000002l.5
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000002l | 154204 | 155247 | - | add.evm.TU.utg000002l.5 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 38,684.28 Da | 61.73 | 68.56 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 161 | 206 | 6.2E-13 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 116 | 158 | 3.5E-7 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 82 | 273 | 4.45E-35 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 51 | 1.31E-6 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 59 | 293 | 1.8E-35 | IPR015915 |
| SMART | SM00612 | kelc_smart | 172 | 219 | 1.0E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 123 | 171 | 3.5E-5 | IPR006652 |
| SMART | SM00256 | fbox_2 | 13 | 53 | 0.0019 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_030954773.1 | F-box/kelch-repeat protein At2g44130-like [Quercus lobata] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1R3HNJ0 | F-box domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_27889 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology