Basic Information
Locus ID:
add.evm.TU.utg000002l.179
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000002l | 3663814 | 3667463 | + | add.evm.TU.utg000002l.179 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.31 | 100,014.65 Da | 33.19 | 109.66 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 453 | 511 | 6.4E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 163 | 181 | 0.71 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 62 | 2.5E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 803 | 905 | 6.1E-6 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 260 | 319 | 7.9E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 69 | 415 | 6.36E-62 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 906 | 9.26E-26 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 360 | 615 | 8.5E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 225 | 325 | 6.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 135 | 9.3E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 656 | 755 | 4.6E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 326 | 622 | 8.2E-81 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 913 | 1.8E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 136 | 224 | 5.7E-24 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 137 | 161 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 475 | 499 | 7.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 258 | 281 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 282 | 306 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 330 | 354 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 426 | 450 | 180.0 | IPR003591 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_017981861.1 | PREDICTED: receptor protein kinase CLAVATA1 [Theobroma cacao] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2P2JCU4 | Non-specific serine/threonine protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology