Basic Information
Locus ID:
add.evm.TU.utg000001l.137
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Reverse transcriptase (RNA-dependent DNA polymerase)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000001l | 11114821 | 11115576 | + | add.evm.TU.utg000001l.137 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 28,954.24 Da | 37.60 | 85.86 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_045795575.1 | uncharacterized protein LOC123890079 [Trifolium pratense] | 0 |
| TrEMBL | A0A2Z6NQD4 | Reverse transcriptase domain-containing protein (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_221470 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23361 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017683 |
| Amaranthaceae | Suaeda glauca | 26 | Sgl03531, Sgl03532, Sgl06702, Sgl08674, Sgl08675, Sgl10543 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0013210 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb3G20438, Lb4G25393 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000001l.137 |