Basic Information
Locus ID:
Zosma50g00120.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_50 | 200159 | 203066 | + | Zosma50g00120.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 98,619.61 Da | 36.54 | 92.70 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 561 | 838 | 2.94687E-93 | - |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 393 | 435 | 6.2E-7 | IPR025875 |
| Pfam | PF00069 | Protein kinase domain | 556 | 763 | 6.2E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 237 | 296 | 4.2E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 110 | 439 | 4.08E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 540 | 835 | 1.6E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 66 | 144 | 2.4E-9 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 517 | 632 | 1.2E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 328 | 453 | 3.5E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 145 | 326 | 1.5E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 633 | 848 | 3.9E-55 | - |
| SMART | SM00220 | serkin_6 | 555 | 839 | 6.2E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 555 | 839 | 38.322235 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 561 | 583 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 680 | 692 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01820.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_043719822.1 | - | 0 |
| Q9SIT1 | Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P675 | Kinase-like protein OS=Zostera marina OX=29655 GN=ZOSMA_363G00040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology