halophFGD

Basic Information

Locus ID: Zosma1308g00020.v3.1

Species & Taxonomic ID: Zostera marina & 29655

Genome Assembly: GCA_001185155.1

Short Name: NTMC2T4.1

Description: Synaptotagmin-like mitochondrial-lipid-binding domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold_1308	34716	35551	+	Zosma1308g00020.v3.1

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
10.28	6,083.29 Da	22.85	131.27	0.49

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description
TAIR	AT3G61050.1	Calcium-dependent lipid-binding (CaLB domain) family protein.
RefSeq	XP_042977325.1	-
Swiss-Prot	Q9LEX1	Calcium-dependent lipid-binding protein OS=Arabidopsis thaliana OX=3702 GN=CLB PE=1 SV=1
TrEMBL	A0A0K9Q4D3	-

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg1853, jg1855, jg24021, jg26840, jg29281, jg31611, jg7967
Aizoaceae	Mesembryanthemum crystallinum	3	gene_23253, gene_25203, gene_8952
Amaranthaceae	Atriplex hortensis	3	Ah014275, Ah023124, Ah034772
Amaranthaceae	Beta vulgaris	2	BVRB_2g030700, BVRB_8g193420
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg21130, Sbi_jg22665, Sbi_jg25572, Sbi_jg4373 ... Sbi_jg49452, Sbi_jg9394
Amaranthaceae	Salicornia europaea	3	Seu_jg16550, Seu_jg19220, Seu_jg5790
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00000329, GOSA_00011031, GOSA_00016254
Amaranthaceae	Suaeda glauca	8	Sgl11226, Sgl13035, Sgl16621, Sgl18263, Sgl41941, Sgl46733 ... Sgl62344, Sgl66881
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000011834, gene:ENSEOMG00000013665 ... gene:ENSEOMG00000019699, gene:ENSEOMG00000020616, gene:ENSEOMG00000032497, gene:ENSEOMG00000033238, gene:ENSEOMG00000044724, gene:ENSEOMG00000048863, gene:ENSEOMG00000051238
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.1AG0005920, CQ.Regalona.r1.1BG0021500 ... CQ.Regalona.r1.2AG0023260, CQ.Regalona.r1.2BG0023810, CQ.Regalona.r1.8AG0022620, CQ.Regalona.r1.8BG0019800
Anacardiaceae	Pistacia vera	3	pistato.v30003310, pistato.v30250350, pistato.v30261630
Apiaceae	Apium graveolens	3	Ag10G00322, Ag6G01644, Ag7G01908
Arecaceae	Cocos nucifera	6	COCNU_01G018290, COCNU_01G018300, COCNU_07G008830 ... COCNU_10G006860, COCNU_11G007980, scaffold013686G000010
Arecaceae	Phoenix dactylifera	7	gene-LOC103702905, gene-LOC103706481, gene-LOC103708196 ... gene-LOC103711477, gene-LOC103715900, gene-LOC103715911, gene-LOC120109152
Asparagaceae	Asparagus officinalis	6	AsparagusV1_01.116.V1.1, AsparagusV1_04.1872.V1.1 ... AsparagusV1_04.2241.V1.1, AsparagusV1_07.819.V1.1, AsparagusV1_08.1575.V1.1, AsparagusV1_10.208.V1.1
Asteraceae	Flaveria trinervia	6	Ftri14G31530, Ftri15G18830, Ftri16G19596, Ftri5G25399 ... Ftri7G01782, Ftri7G03166
Brassicaceae	Arabidopsis thaliana	5	AT1G05500.1, AT3G60950.1, AT3G61030.1, AT3G61050.1 ... AT5G11100.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10005905m.g.v1.0, Thhalv10007226m.g.v1.0 ... Thhalv10013100m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g04370.v2.2, Sp5g02310.v2.2, Sp6g32400.v2.2
Brassicaceae	Brassica nigra	5	BniB03g001340.2N, BniB05g026260.2N, BniB06g045040.2N ... BniB06g053410.2N, BniB06g062230.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G0460, Ceq04G2373, Ceq06G1450
Casuarinaceae	Casuarina glauca	3	Cgl02G0489, Cgl04G2576, Cgl06G1512
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno03g03550, gene.Cymno15g04730
Dunaliellaceae	Dunaliella salina	1	Dusal.1289s00002.v1.0
Hydrocharitaceae	Thalassia testudinum	5	gene.Thate01g04510, gene.Thate02g03310, gene.Thate05g01680 ... gene.Thate07g11430, gene.Thate07g11440
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-9483
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG04.219, evm.TU.LG07.1471, evm.TU.LG07.1472 ... evm.TU.LG07.600
Plantaginaceae	Plantago ovata	3	Pov_00001116, Pov_00016804, Pov_00018156
Plumbaginaceae	Limonium bicolor	7	Lb0G37702, Lb1G02997, Lb1G02998, Lb1G03809, Lb2G10535 ... Lb2G10542, Lb6G32031
Poaceae	Echinochloa crus-galli	12	AH01.4325, AH03.897, AH08.998, AH09.2491, BH01.4648 ... BH03.1029, BH08.1094, BH09.2711, CH01.4944, CH03.1185, CH08.1175, CH09.2909
Poaceae	Eleusine coracana subsp. coracana	7	gene-QOZ80_3AG0241280, gene-QOZ80_3BG0286810 ... gene-QOZ80_4AG0301800, gene-QOZ80_4BG0332540, gene-QOZ80_7AG0564210, gene-QOZ80_8AG0625840, gene-QOZ80_8BG0654690
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.2HG0146160.1, HORVU.MOREX.r3.2HG0205390.1 ... HORVU.MOREX.r3.4HG0391490.1, HORVU.MOREX.r3.6HG0555000.1
Poaceae	Lolium multiflorum	4	gene-QYE76_032184, gene-QYE76_035748, gene-QYE76_069502 ... gene-QYE76_071132
Poaceae	Oryza coarctata	6	Oco05G008320, Oco06G008600, Oco07G017390, Oco08G016800 ... Oco13G005990, Oco15G005890
Poaceae	Oryza sativa	4	LOC_Os03g14700.1, LOC_Os04g55220.1, LOC_Os07g22640.1 ... LOC_Os08g20544.1
Poaceae	Paspalum vaginatum	5	gene-BS78_01G416500, gene-BS78_02G080200 ... gene-BS78_06G249500, gene-BS78_06G256900, gene-BS78_07G125400
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0102063, Pt_Chr0102084, Pt_Chr0300729, Pt_Chr0300784 ... Pt_Chr0303948
Poaceae	Sporobolus alterniflorus	10	Chr01G029640, Chr12G009890, Chr16G012520, Chr17G011830 ... Chr23G002530, Chr24G005920, Chr25G002060, Chr26G016820, Chr28G005580, Chr30G002040
Poaceae	Thinopyrum elongatum	5	Tel1E01G001100, Tel2E01G432200, Tel2E01G877200 ... Tel4E01G387400, Tel6E01G223600
Poaceae	Triticum dicoccoides	8	gene_TRIDC2AG034640, gene_TRIDC2AG072570 ... gene_TRIDC2BG037620, gene_TRIDC2BG078770, gene_TRIDC4AG011140, gene_TRIDC4BG039370, gene_TRIDC6AG012790, gene_TRIDC6BG017910
Poaceae	Triticum aestivum	11	TraesCS2A02G244800.1, TraesCS2A02G517200.1 ... TraesCS2B02G262400.1, TraesCS2B02G545700.3, TraesCS2D02G242600.1, TraesCS2D02G518800.1, TraesCS4A02G081200.1, TraesCS4B02G222600.1, TraesCS4D02G223100.1, TraesCS6A02G098900.2, TraesCS6D02G083600.2
Poaceae	Zea mays	4	Zm00001eb010800_P002, Zm00001eb068630_P001 ... Zm00001eb110300_P001, Zm00001eb305750_P002
Poaceae	Zoysia japonica	7	nbis-gene-2242, nbis-gene-22999, nbis-gene-3869 ... nbis-gene-38847, nbis-gene-41988, nbis-gene-45886, nbis-gene-6012
Poaceae	Zoysia macrostachya	5	Zma_g1632, Zma_g20547, Zma_g22088, Zma_g22789, Zma_g6304
Portulacaceae	Portulaca oleracea	8	evm.TU.LG03.2481, evm.TU.LG04.2373, evm.TU.LG10.1627 ... evm.TU.LG17.1521, evm.TU.LG18.392, evm.TU.LG19.1187, evm.TU.LG24.1190, evm.TU.LG26.646
Posidoniaceae	Posidonia oceanica	2	gene.Posoc02g04360, gene.Posoc07g06610
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_10_RagTag.864, evm.TU.Scaffold_4_RagTag.2279 ... evm.TU.Scaffold_5_RagTag.346
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-10917, nbisL1-mrna-13610, nbisL1-mrna-25189
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-15124, nbisL1-mrna-17169, nbisL1-mrna-3417
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-10469, nbisL1-mrna-5018, nbisL1-mrna-9117
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000004l.182, evm.TU.utg000006l.525 ... evm.TU.utg000008l.1333
Rhizophoraceae	Kandelia obovata	4	Maker00000374, Maker00004116, Maker00004195, Maker00013966
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-1850, nbisL1-mrna-3763, nbisL1-mrna-9244
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-22302, nbisL1-mrna-6968, nbisL1-mrna-7847
Salicaceae	Populus euphratica	5	populus_peu04741, populus_peu05708, populus_peu11089 ... populus_peu27815, populus_peu31751
Solanaceae	Lycium barbarum	6	gene-LOC132603116, gene-LOC132632957, gene-LOC132636157 ... gene-LOC132636982, gene-LOC132640623, gene-LOC132645624
Solanaceae	Solanum chilense	7	SOLCI000496900, SOLCI001205500, SOLCI003500500 ... SOLCI003627700, SOLCI005585900, SOLCI007132900, SOLCI007529200
Solanaceae	Solanum pennellii	6	gene-LOC107001825, gene-LOC107007373, gene-LOC107007923 ... gene-LOC107019114, gene-LOC107025848, gene-LOC107028030
Tamaricaceae	Reaumuria soongarica	3	STRG.12226_chr02_+, gene_1484, gene_18207
Tamaricaceae	Tamarix chinensis	3	TC02G0537, TC03G2707, TC10G1195
Zosteraceae	Zostera marina	6	Zosma01g32540.v3.1, Zosma02g06130.v3.1, Zosma05g13070.v3.1 ... Zosma06g05410.v3.1, Zosma06g25720.v3.1, Zosma1308g00020.v3.1