Basic Information
Locus ID:
Zosma1298g00010.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold_1298 | 8238 | 12920 | + | Zosma1298g00010.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 71,827.26 Da | 43.44 | 90.54 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 353 | 624 | 1.8E-28 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 47 | 270 | 4.6E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 266 | 5.62E-48 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 338 | 627 | 9.83E-54 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 330 | 422 | 1.7E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 119 | 307 | 8.1E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 117 | 1.7E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 424 | 631 | 2.1E-42 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 344 | 631 | 25.022139 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 302 | 25.926716 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30740.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_017648011.1 | PREDICTED: PTI1-like tyrosine-protein kinase 1 [Gossypium arboreum] | 0 |
| Q41328 | Pto-interacting protein 1 OS=Solanum lycopersicum OX=4081 GN=PTI1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9PK50 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 4 | Zosma02g25370.v3.1, Zosma1298g00010.v3.1 ... |