Basic Information
Locus ID:
Zosma06g30490.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 29099669 | 29107964 | - | Zosma06g30490.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 63,296.18 Da | 45.13 | 69.41 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 55 | 179 | 4.77948E-37 | IPR002083 |
| CDD | cd02659 | peptidase_C19C | 196 | 524 | 3.62462E-171 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 198 | 519 | 5.2E-47 | IPR001394 |
| Pfam | PF00917 | MATH domain | 60 | 180 | 9.7E-19 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 51 | 185 | 7.52E-39 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 193 | 540 | 1.18E-96 | IPR038765 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 52 | 194 | 2.7E-50 | IPR008974 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 195 | 523 | 2.3E-90 | - |
| SMART | SM00061 | math_3 | 58 | 159 | 4.9E-16 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 198 | 522 | 40.246323 | IPR028889 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 53 | 178 | 35.604797 | IPR002083 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 199 | 214 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 438 | 455 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 52 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_038985458.1 | ubiquitin carboxyl-terminal hydrolase 12 isoform X1 [Phoenix dactylifera] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B9AN73 | ubiquitinyl hydrolase 1 OS=Phoenix dactylifera OX=42345 GN=LOC103707271 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology