Basic Information
Locus ID:
Zosma06g30480.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 29090400 | 29099631 | - | Zosma06g30480.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 70,052.12 Da | 45.02 | 86.61 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 361 | 569 | 1.2E-54 | IPR029346 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 99 | 351 | 9.4E-75 | IPR024729 |
| Gene3D | G3DSA:3.10.20.90 | - | 277 | 374 | 1.8E-28 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 161 | 276 | 1.7E-39 | - |
| Coils | Coil | Coil | 16 | 36 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.2 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_038985458.1 | ubiquitin carboxyl-terminal hydrolase 12 isoform X1 [Phoenix dactylifera] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B9AN73 | ubiquitinyl hydrolase 1 OS=Phoenix dactylifera OX=42345 GN=LOC103707271 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology