Basic Information
Locus ID:
Zosma06g29040.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 28218202 | 28228354 | + | Zosma06g29040.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 117,052.05 Da | 48.24 | 79.58 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15568 | PHD5_NSD | 702 | 739 | 7.26398E-13 | - |
| Pfam | PF16135 | Tify domain binding domain | 635 | 684 | 2.3E-17 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 459 | 514 | 1.9E-15 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 702 | 742 | 2.4E-7 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 782 | 843 | 7.4E-7 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 691 | 743 | 7.82E-16 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 688 | 764 | 1.2E-16 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 765 | 856 | 1.4E-9 | IPR013083 |
| SMART | SM00249 | PHD_3 | 792 | 846 | 0.0077 | IPR001965 |
| SMART | SM00249 | PHD_3 | 701 | 742 | 6.6E-9 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 699 | 744 | 10.469 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 702 | 741 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 337 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36720.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_008779219.1 | uncharacterized protein LOC103698933 isoform X1 [Phoenix dactylifera] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P2H3 | PHD-type domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_41G00900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology