Basic Information
Locus ID:
Zosma06g27260.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the peroxidase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 26697918 | 26705842 | - | Zosma06g27260.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 105,067.41 Da | 55.91 | 65.75 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 545 | 586 | 5.41236E-19 | - |
| CDD | cd00691 | ascorbate_peroxidase | 600 | 845 | 3.96569E-139 | - |
| Pfam | PF13639 | Ring finger domain | 544 | 586 | 6.1E-12 | IPR001841 |
| Pfam | PF00141 | Peroxidase | 622 | 822 | 3.2E-41 | IPR002016 |
| Pfam | PF12609 | Wound-induced protein | 846 | 918 | 2.4E-18 | IPR022251 |
| SUPERFAMILY | SSF48113 | Heme-dependent peroxidases | 599 | 841 | 1.39E-74 | IPR010255 |
| SUPERFAMILY | SSF57850 | RING/U-box | 527 | 592 | 5.05E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 510 | 591 | 6.6E-19 | IPR013083 |
| Gene3D | G3DSA:1.10.520.10 | - | 614 | 841 | 2.9E-100 | - |
| Gene3D | G3DSA:1.10.420.10 | Peroxidase, domain 2 | 727 | 834 | 2.9E-100 | - |
| SMART | SM00184 | ring_2 | 545 | 585 | 3.9E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 545 | 586 | 13.020386 | IPR001841 |
| ProSiteProfiles | PS50873 | Plant heme peroxidase family profile. | 685 | 870 | 14.88929 | IPR002016 |
| ProSitePatterns | PS00436 | Peroxidases active site signature. | 628 | 639 | - | IPR019794 |
| ProSitePatterns | PS00435 | Peroxidases proximal heme-ligand signature. | 750 | 760 | - | IPR019793 |
| PRINTS | PR00459 | Plant ascorbate peroxidase signature | 685 | 703 | 6.7E-109 | IPR002207 |
| PRINTS | PR00459 | Plant ascorbate peroxidase signature | 628 | 643 | 6.7E-109 | IPR002207 |
| PRINTS | PR00459 | Plant ascorbate peroxidase signature | 725 | 742 | 6.7E-109 | IPR002207 |
| PRINTS | PR00459 | Plant ascorbate peroxidase signature | 744 | 765 | 6.7E-109 | IPR002207 |
| PRINTS | PR00459 | Plant ascorbate peroxidase signature | 792 | 817 | 6.7E-109 | IPR002207 |
| PRINTS | PR00459 | Plant ascorbate peroxidase signature | 646 | 656 | 6.7E-109 | IPR002207 |
| PRINTS | PR00459 | Plant ascorbate peroxidase signature | 607 | 627 | 6.7E-109 | IPR002207 |
| PRINTS | PR00459 | Plant ascorbate peroxidase signature | 766 | 790 | 6.7E-109 | IPR002207 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 628 | 642 | 2.1E-23 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 774 | 789 | 2.1E-23 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 704 | 716 | 2.1E-23 | IPR002016 |
| PRINTS | PR00459 | Plant ascorbate peroxidase signature | 704 | 716 | 6.7E-109 | IPR002207 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 686 | 703 | 2.1E-23 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 750 | 765 | 2.1E-23 | IPR002016 |
| PRINTS | PR00459 | Plant ascorbate peroxidase signature | 660 | 684 | 6.7E-109 | IPR002207 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 879 | 910 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 879 | 898 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07890.1 | ascorbate peroxidase 1. Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. | 0 |
| RefSeq | XP_017231117.1 | PREDICTED: L-ascorbate peroxidase, cytosolic-like [Daucus carota subsp. sativus] | 0 |
| Q9FE01 | L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=APX2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PI31 | RING-type domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_230G00350 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology