Basic Information
Locus ID:
Zosma06g24040.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 24486776 | 24488173 | + | Zosma06g24040.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 26,834.65 Da | 38.27 | 70.69 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 31 | 239 | 6.9E-84 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 130 | 229 | 6.67E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 127 | 242 | 1.2E-45 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 131 | 230 | 24.982769 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 121 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_010936171.1 | auxin-responsive protein IAA30 [Elaeis guineensis] | 0 |
| P0C132 | Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9Q082 | Auxin-responsive protein OS=Zostera marina OX=29655 GN=ZOSMA_13G00690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology