Basic Information
Locus ID:
Zosma06g23210.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 23897545 | 23899271 | - | Zosma06g23210.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 54,680.30 Da | 36.74 | 93.50 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 377 | 446 | 2.8E-13 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 32 | 359 | 5.3E-69 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 32 | 358 | 3.44E-70 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 31 | 364 | 1.0E-98 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 375 | 472 | 9.8E-6 | - |
| SMART | SM00768 | X8_cls | 376 | 460 | 1.8E-34 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 266 | 279 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_009413316.1 | - | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9PQL3 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology