Basic Information
Locus ID:
Zosma06g22370.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 23279002 | 23280879 | - | Zosma06g22370.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 57,101.45 Da | 44.63 | 59.32 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 253 | 309 | 1.3E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 426 | 483 | 1.8E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 417 | 485 | 7.06E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 250 | 311 | 1.83E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 239 | 312 | 1.9E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 410 | 486 | 1.9E-34 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 252 | 310 | 2.9E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 425 | 484 | 1.1E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 247 | 311 | 24.294273 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 420 | 485 | 37.252258 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 407 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_034683906.1 | probable WRKY transcription factor 3 isoform X1 [Vitis riparia] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9P7G9 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology