Basic Information
Locus ID:
Zosma06g21820.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 22865745 | 22868875 | + | Zosma06g21820.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 73,257.54 Da | 50.20 | 89.15 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 185 | 447 | 5.62349E-123 | - |
| Pfam | PF00069 | Protein kinase domain | 186 | 448 | 2.4E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 479 | 637 | 1.06E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 185 | 488 | 5.8E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 179 | 275 | 7.6E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 473 | 631 | 4.0E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 276 | 472 | 1.3E-59 | - |
| SMART | SM00220 | serkin_6 | 186 | 448 | 1.9E-97 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 491 | 526 | 8.655371 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 186 | 448 | 51.21244 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 310 | 322 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 192 | 218 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_008777902.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1-like [Phoenix dactylifera] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PRJ6 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology