Basic Information
Locus ID:
Zosma06g20220.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 21530231 | 21530722 | - | Zosma06g20220.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.07 | 18,052.59 Da | 42.08 | 80.31 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 89 | 150 | 2.90611E-13 | IPR002048 |
| CDD | cd00051 | EFh | 3 | 65 | 5.76612E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 3 | 63 | 4.3E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 88 | 149 | 6.1E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 2 | 153 | 1.38E-33 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 69 | 1.5E-14 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 75 | 160 | 2.9E-20 | - |
| SMART | SM00054 | efh_1 | 39 | 67 | 78.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 89 | 117 | 1.2 | IPR002048 |
| SMART | SM00054 | efh_1 | 125 | 153 | 9.5E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 3 | 31 | 0.03 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 85 | 120 | 11.835447 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 121 | 156 | 13.034948 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 1 | 34 | 11.947029 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 134 | 146 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 98 | 110 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 12 | 24 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32250.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_010919971.1 | probable calcium-binding protein CML18 [Elaeis guineensis] | 0 |
| Q9AWK2 | Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9PE60 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology