Basic Information
Locus ID:
Zosma06g18590.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 20268679 | 20269470 | + | Zosma06g18590.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 30,198.63 Da | 64.76 | 87.07 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 73 | 168 | 3.09E-9 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 115 | 169 | 8.0E-6 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A0K9P4R9 | Ubiquitin-like domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_38G01070 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno13g00950 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g02530 |
| Zosteraceae | Zostera marina | 1 | Zosma06g18590.v3.1 |