Basic Information
Locus ID:
Zosma06g16020.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
CCR4-associated factor 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 18054264 | 18055088 | + | Zosma06g16020.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 31,373.53 Da | 22.52 | 97.77 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04857 | CAF1 family ribonuclease | 18 | 140 | 1.0E-7 | IPR006941 |
| Pfam | PF04857 | CAF1 family ribonuclease | 163 | 247 | 3.6E-7 | IPR006941 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 15 | 269 | 2.95E-83 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 2 | 272 | 9.3E-93 | IPR036397 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32070.1 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein. | 0 |
| RefSeq | XP_020084644.1 | - | 0 |
| Q9SKZ2 | Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9PTK2 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology