Basic Information
Locus ID:
Zosma06g13000.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 9975997 | 9978778 | - | Zosma06g13000.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 72,304.48 Da | 44.60 | 100.41 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 338 | 601 | 1.1E-39 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 68 | 107 | 9.1E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 317 | 601 | 9.29E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 68 | 258 | 2.55E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 67 | 249 | 1.8E-50 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 410 | 606 | 2.3E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 305 | 409 | 3.1E-34 | - |
| SMART | SM00220 | serkin_6 | 334 | 606 | 6.3E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 334 | 606 | 33.21986 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 340 | 362 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 456 | 468 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010925612.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X2 [Elaeis guineensis] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9NVA4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology