Basic Information
Locus ID:
Zosma06g12360.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 9270358 | 9271177 | + | Zosma06g12360.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.70 | 29,369.43 Da | 36.55 | 97.86 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 5 | 48 | 8.0E-8 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 80 | 235 | 4.91E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 2 | 67 | 3.14E-9 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 69 | 238 | 4.8E-6 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 49 | 3.6E-10 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 48 | 11.987943 | IPR001810 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_027087900.1 | - | 0 |
| TrEMBL | A0A0K9Q376 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Zosteraceae | Zostera marina | 7 | Zosma03g00800.v3.1, Zosma03g05030.v3.1, Zosma03g05040.v3.1 ... |