Basic Information
Locus ID:
Zosma06g11550.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 7835910 | 7849293 | - | Zosma06g11550.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 205,038.98 Da | 46.78 | 85.65 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1462 | 1883 | 1.66702E-115 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1510 | 1888 | 2.0E-79 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1454 | 1881 | 2.62E-97 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 181 | 623 | 1.44E-37 | IPR016024 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1759 | 1886 | 2.6E-31 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1403 | 1656 | 2.3E-44 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 170 | 649 | 9.2E-54 | IPR011989 |
| SMART | SM00119 | hect_3 | 1476 | 1888 | 1.7E-81 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1577 | 1888 | 55.2813 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1183 | 1204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 710 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 961 | 1073 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 961 | 1004 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1049 | 1068 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 67 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_010265985.1 | PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Nelumbo nucifera] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PX68 | HECT-type E3 ubiquitin transferase OS=Zostera marina OX=29655 GN=ZOSMA_159G00050 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology