Basic Information
Locus ID:
Zosma06g10410.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 6810542 | 6812491 | + | Zosma06g10410.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 55,455.03 Da | 33.62 | 95.61 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 27 | 349 | 1.8E-65 | IPR000490 |
| Pfam | PF07983 | X8 domain | 366 | 435 | 4.4E-12 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 27 | 349 | 3.33E-69 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 26 | 355 | 7.5E-97 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 360 | 464 | 3.6E-5 | - |
| SMART | SM00768 | X8_cls | 365 | 449 | 3.7E-33 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_038972143.1 | glucan endo-1,3-beta-glucosidase 4 isoform X1 [Phoenix dactylifera] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9P6S6 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology