Basic Information
Locus ID:
Zosma06g06980.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Core-2/I-Branching enzyme
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 3910079 | 3914410 | - | Zosma06g06980.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 70,437.31 Da | 45.08 | 79.46 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02440 | AdoMet_MTases | 409 | 526 | 7.2853E-16 | - |
| Pfam | PF13847 | Methyltransferase domain | 409 | 527 | 2.0E-14 | IPR025714 |
| Pfam | PF02485 | Core-2/I-Branching enzyme | 80 | 306 | 2.2E-77 | IPR003406 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 385 | 560 | 3.79E-23 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 368 | 582 | 2.8E-57 | - |
Gene Ontology
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11730.1 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein. | 0 |
| RefSeq | XP_010942037.1 | glycosyltransferase BC10 [Elaeis guineensis] | 0 |
| Q65XS5 | Glycosyltransferase BC10 OS=Oryza sativa subsp. japonica OX=39947 GN=BC10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9P6H4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg1026 |
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_21611, gene_21613, gene_21614 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah010306 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g218050 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg45826 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg20185 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022406 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl00016, Sgl02376, Sgl05084, Sgl07505 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000018703, gene:ENSEOMG00000037783 ... |
| Amaranthaceae | Chenopodium quinoa | 7 | CQ.Regalona.r1.4AG0009850, CQ.Regalona.r1.7BG0008160 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30113740 |
| Apiaceae | Apium graveolens | 1 | Ag9G00119 |
| Arecaceae | Cocos nucifera | 1 | scaffold025950G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103723941 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.2253.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G07064 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G34360.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10026003m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g32150.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g003950.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G0041 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G0047 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g03410 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0194s00010.v1.0 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.90 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00035659 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb3G17218, Lb3G17225 |
| Poaceae | Echinochloa crus-galli | 4 | AH04.1633, AH07.1863, BH04.1646, CH04.1879 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0685390, gene-QOZ80_9BG0711520 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0125940.1, HORVU.MOREX.r3.7HG0703680.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_038626, gene-QYE76_059193, gene-QYE76_066570 |
| Poaceae | Oryza coarctata | 2 | Oco21G007300, Oco22G008430 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g35340.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G169700, gene-BS78_05G169900 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0103119, Pt_Chr0103125 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr31G006780 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G335200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG021730, gene_TRIDC2BG026300 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G171500.1, TraesCS2B02G197900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb201910_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-44235 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18074 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.403, evm.TU.LG09.1645 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g06500 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.2164 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5974 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-16917 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-3376 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.173 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016774 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4734 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14088 |
| Salicaceae | Populus euphratica | 1 | populus_peu08916 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599137 |
| Solanaceae | Solanum chilense | 1 | SOLCI003002300 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107002689, gene-LOC114078438 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7809 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G0525 |
| Zosteraceae | Zostera marina | 1 | Zosma06g06980.v3.1 |