Basic Information
Locus ID:
Zosma06g06780.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 3787828 | 3789204 | - | Zosma06g06780.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 49,501.10 Da | 38.08 | 93.65 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 184 | 205 | 0.53 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 78 | 430 | 2.47E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 228 | 423 | 9.2E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 227 | 6.2E-30 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 181 | 205 | 3.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 271 | 295 | 21.0 | IPR003591 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 332 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_038984917.1 | MDIS1-interacting receptor like kinase 1-like [Phoenix dactylifera] | 0 |
| TrEMBL | A0A0K9PQ60 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology