Basic Information
Locus ID:
Zosma06g04930.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 2756668 | 2758827 | + | Zosma06g04930.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.22 | 72,131.01 Da | 49.33 | 91.15 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 42 | 122 | 1.4E-5 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 228 | 475 | 3.3E-81 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 37 | 123 | 1.88E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 32 | 146 | 1.1E-12 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 228 | 499 | 89.051529 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 42 | 106 | 9.744267 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 641 | - | - |
| Coils | Coil | Coil | 547 | 567 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_017219970.1 | PREDICTED: BTB/POZ domain-containing protein At1g30440 [Daucus carota subsp. sativus] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9PFM7 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology