Basic Information
Locus ID:
Zosma06g02240.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 1223240 | 1226868 | + | Zosma06g02240.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 43,951.60 Da | 37.71 | 105.71 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 62 | 317 | 1.4E-77 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 75 | 312 | 6.52E-40 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 90 | 391 | 1.7E-78 | IPR027417 |
| SMART | SM00382 | AAA_5 | 113 | 251 | 4.8E-4 | IPR003593 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 91 | 250 | 23.537754 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 261 | 336 | 15.000991 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 268 | 276 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 307 | 336 | 1.2E-42 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 221 | 250 | 1.2E-42 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 149 | 178 | 1.2E-42 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 265 | 293 | 1.2E-42 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 183 | 212 | 1.2E-42 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_010907253.1 | DNA repair protein recA homolog 2, mitochondrial isoform X2 [Elaeis guineensis] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9Q2N8 | RecA OS=Zostera marina OX=29655 GN=ZOSMA_123G00480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology