Basic Information
Locus ID:
Zosma05g32500.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
Sec12-like protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 31453126 | 31455313 | + | Zosma05g32500.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 44,453.02 Da | 37.49 | 81.72 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 101 | 361 | 7.14E-29 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 57 | 368 | 1.4E-61 | IPR015943 |
| SMART | SM00320 | WD40_4 | 192 | 230 | 0.55 | IPR001680 |
| SMART | SM00320 | WD40_4 | 147 | 188 | 6.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 324 | 363 | 53.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 282 | 321 | 8.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 198 | 239 | 9.071468 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50550.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_008795178.1 | SEC12-like protein 2 isoform X1 [Phoenix dactylifera] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A0K9NHS1 | Putative Prolactin regulatory element-binding protein OS=Zostera marina OX=29655 GN=ZOSMA_99G00940 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology