Basic Information
Locus ID:
Zosma05g30410.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 30292435 | 30301283 | - | Zosma05g30410.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 41,235.88 Da | 48.24 | 75.26 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 307 | 355 | 8.5E-9 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 47 | 258 | 6.45E-25 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 289 | 360 | 3.87E-15 | IPR036028 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 287 | 366 | 4.5E-14 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 45 | 274 | 5.3E-12 | IPR027267 |
| SMART | SM00326 | SH3_2 | 303 | 358 | 4.8E-11 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 300 | 359 | 18.484896 | IPR001452 |
| Coils | Coil | Coil | 251 | 271 | - | - |
| Coils | Coil | Coil | 193 | 213 | - | - |
| Coils | Coil | Coil | 149 | 176 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_020277352.1 | SH3 domain-containing protein 2 [Asparagus officinalis] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PIS4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology