Basic Information
Locus ID:
Zosma05g30300.v3.1
Species & Taxonomic ID:
Zostera marina & 29655
Genome Assembly:
GCA_001185155.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 30218966 | 30220034 | - | Zosma05g30300.v3.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.85 | 23,933.01 Da | 54.51 | 81.60 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF47473 | EF-hand | 42 | 195 | 4.74E-10 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 29 | 121 | 1.6E-12 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 36 | 163 | 1.6E-12 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46700.2 | CDPK-related kinase 3. | 0 |
| RefSeq | XP_042505287.1 | - | 0 |
| Q9ZUZ2 | CDPK-related kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PIT4 | CDPK-related kinase 3 OS=Zostera marina OX=29655 GN=ZOSMA_24G01570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000032068 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30165530 |
| Arecaceae | Cocos nucifera | 4 | COCNU_01G016240, COCNU_10G004470, COCNU_16G000340 ... |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_02.1961.V1.1, AsparagusV1_08.550.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G26530 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno15g03480 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0084940.1, HORVU.MOREX.r3.3HG0283610.1 |
| Poaceae | Zea mays | 3 | Zm00001eb093950_P001, Zm00001eb145760_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-34372, nbis-gene-45412 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG02.1200 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-799 |
| Zosteraceae | Zostera marina | 2 | Zosma02g23970.v3.1, Zosma05g30300.v3.1 |